Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849309.1_cds_XP_016510749.1_23557
CDS Infomation

[gene=LOC107828013] [db_xref=GeneID:107828013] [protein=transcription factor PIF1-like] [protein_id=XP_016510749.1] [location=complement(join(6220..6224,6610..6688,7058..7441,9435..9500,9594..9659,9759..9857,13970..14855,14959..15047))] [gbkey=CDS]
Sequence

ATGAATCATTCAGTTCCTGAGTTTGATATGGATGATGACTACACTATTCCTACGTCTTCT
GGTCTTACCAGACCTAAAAAGTCTGCAATGGCGGAAGAGGATATCATGGAACTATTGTGG
CATAATGGACAAGTGGTTATGCAGAGCCAAAATCAAAGATCTCTGAAGAAATCTCACATT
AGCAACGGCGGTGGCGGAGGTGGCAGCGGTGATGCGCTTATTCCCTCCGAACAAGCTGTC
AGTAGAGAGATCCGACATGTAGAGGAAACTACTACACCACAGCAACTGTTTATGCAGGAG
GACGAGATGGCCTCATGGCTTCACTACCCACTCGATGACTCCTCCTCCTTCGAACGTGAT
CTTTACGCCGATCTCCTTTATTCCACACCGAGCGCAACCGTTACAACCGCTGCGCCGCCG
CGAGAAATCCGTACGCCCCCGGTGGAGATCCGTCCACCTCCGCCGCATCCATCCCCTGCA
CCGCCGATTGCAGTGGCTCCACGACCGCCTATACCTCCTCCTGCAAGACGTCCCGGCACT
GAAAGCTCACATCGGTTCCAGAACTTCGGACACTTCTCGCGATTGCCTAGTCGAACAAGG
TCAGAACTTGGTCCGTCAAATTCGAGCAAGTCACCTAGAGAATCAACGGTTGTGGACTCA
AACGAAACTCCAATTTCAGGGCCTGAATCTAGGGTTTCACAGGTAGCGGATAATGTAGTA
CCGGTTCCCGGCGGAAATGGAGCATGTGGGGCTGTAAATGTCAACGGAACTGCGACTGCG
TCAACGGCAATTAGGGAACCGGCGACAACATGTGAGCTTTCGGTGACGTCATCTCCCGGC
TCAGGAAACAGTATAAACGCCAGCGCTGAACCACCGCTGTCGGAAACGGCGGCGTTGGCG
ACACCGACGGCTGCGGCATCGAATGATCGGAAACGCAAAGGAATAGAAACGGACGACGGG
GATGGTCAGAATGAGGACGCTGAATTTGGGTCTGGTGATACAAAGAAGCATGCACGTGGT
TCAACGTCTACAAAACGATCTCGTGCTGCAGAGGTCCATAATCTTTCGGAAAGGAGACGT
CGAGACAGAATAAATGAGAAGATGAGGGCTCTGCAGGAACTGATACCACGCTGTAACAAG
ACAGACAAAGCTTCAATGCTGGATGAGGCAATTGAGTATTTGAAATCACTGCAATTGCAA
GTGCAGATGATGTCCATGGGATGCGGCATGGTCCCGATGATGTATCCTGGAATGCAGCAA
TACATGCCAGCTATGGGAATGGGCATGGTGGGAATGGGTATGGAGATTGGCATGAACAGG
CCAATGGTTCCATATCCACCTCTATTACCAGGTGCAGCGATGCAGAATGCAGCTGCAGCA
GCACAAATGGGTCCTAGATTTCCTATGGCACCGTTTCATTTGCCACCAGTTCCAGTACCA
GATCCTTCCAGGATGCAAGCCTCAAGTCAGCAAGATCCAATGCTAAATCCACTTGTAGCA
CGTAATCCCAACCAGCCAAGACTTCCGAATTTTAATGATCCATATCAACAGCATTTTGGT
CTCCACCAGGCACAAGTGCAATTACCGCAGAATCAGGCAGTAGAACAGCAAGGTTACAAT
AAACCCGGCAGCAGCAAAGAAGTTGGAAATCCAGGGAATCCTCAATCTGGTTGA

Peptide Sequence

PEP ID

XP_016510749.1
PEP Infomation

PREDICTED: transcription factor PIF1-like [Nicotiana tabacum]
Sequence

MNHSVPEFDMDDDYTIPTSSGLTRPKKSAMAEEDIMELLWHNGQVVMQSQNQRSLKKSHI
SNGGGGGGSGDALIPSEQAVSREIRHVEETTTPQQLFMQEDEMASWLHYPLDDSSSFERD
LYADLLYSTPSATVTTAAPPREIRTPPVEIRPPPPHPSPAPPIAVAPRPPIPPPARRPGT
ESSHRFQNFGHFSRLPSRTRSELGPSNSSKSPRESTVVDSNETPISGPESRVSQVADNVV
PVPGGNGACGAVNVNGTATASTAIREPATTCELSVTSSPGSGNSINASAEPPLSETAALA
TPTAAASNDRKRKGIETDDGDGQNEDAEFGSGDTKKHARGSTSTKRSRAAEVHNLSERRR
RDRINEKMRALQELIPRCNKTDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMYPGMQQ
YMPAMGMGMVGMGMEIGMNRPMVPYPPLLPGAAMQNAAAAAQMGPRFPMAPFHLPPVPVP
DPSRMQASSQQDPMLNPLVARNPNQPRLPNFNDPYQQHFGLHQAQVQLPQNQAVEQQGYN
KPGSSKEVGNPGNPQSG

Transcript Sequence

Gene sequence data has not been registered.